Misplaced Pages

C-C chemokine receptor type 6

Article snapshot taken from[REDACTED] with creative commons attribution-sharealike license. Give it a read and then ask your questions in the chat. We can research this topic together.
(Redirected from CCR6) Mammalian protein found in Homo sapiens

CCR6
Identifiers
AliasesCCR6, BN-1, C-C CKR-6, CC-CKR-6, CCR-6, CD196, CKR-L3, CKRL3, CMKBR6, DCR2, DRY6, GPR29, GPRCY4, STRL22, C-C motif chemokine receptor 6
External IDsOMIM: 601835; MGI: 1333797; HomoloGene: 3214; GeneCards: CCR6; OMA:CCR6 - orthologs
Gene location (Human)
Chromosome 6 (human)
Chr.Chromosome 6 (human)
Chromosome 6 (human)Genomic location for CCR6Genomic location for CCR6
Band6q27Start167,111,807 bp
End167,139,141 bp
Gene location (Mouse)
Chromosome 17 (mouse)
Chr.Chromosome 17 (mouse)
Chromosome 17 (mouse)Genomic location for CCR6Genomic location for CCR6
Band17|17 A1Start8,454,875 bp
End8,475,973 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • lymph node

  • appendix

  • spleen

  • testicle

  • granulocyte

  • blood

  • duodenum

  • gallbladder

  • rectum

  • tonsil
Top expressed in
  • spleen

  • lymph node

  • mesenteric lymph nodes

  • blood

  • subcutaneous adipose tissue

  • spermatid

  • embryo

  • embryo

  • thymus

  • blastocyst
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

1235

12458

Ensembl

ENSG00000112486

ENSMUSG00000040899

UniProt

P51684

O54689

RefSeq (mRNA)

NM_031409
NM_004367
NM_001394582

NM_001190333
NM_001190334
NM_001190335
NM_001190336
NM_001190337

NM_001190338
NM_009835

RefSeq (protein)

NP_004358
NP_113597

NP_001177262
NP_001177263
NP_001177264
NP_001177265
NP_001177266

NP_001177267
NP_033965

Location (UCSC)Chr 6: 167.11 – 167.14 MbChr 17: 8.45 – 8.48 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Chemokine receptor 6 also known as CCR6 is a CC chemokine receptor protein which in humans is encoded by the CCR6 gene. CCR6 has also recently been designated CD196 (cluster of differentiation 196). The gene is located on the long arm of Chromosome 6 (6q27) on the Watson (plus) strand. It is 139,737 bases long and encodes a protein of 374 amino acids (molecular weight 42,494 Da).

Function

This protein belongs to family A of G protein-coupled receptor superfamily. The gene is expressed in lymphatic and non-lymphatic tissue as spleen, lymph nodes, pancreas, colon, appendix, small intestine. CCR6 is expressed on B-cells, immature dendritic cells (DC), T-cells (Th1, Th2, Th17, Treg), natural killer T cells (NKT cells) and neutrophils. The ligand of this receptor is CCL20 or in the other name - macrophage inflammatory protein 3 alpha (MIP-3 alpha). This chemokine receptor is special because it binds only one chemokine ligand CCL20 in compare to other chemokine receptors. CCR6 has a key role in connection between immature DC an adaptive immunity. This receptor has been shown to be important for B-lineage maturation and antigen-driven B-cell differentiation, and it may regulate the migration and recruitment of dendritic cells and T cells during inflammatory and immunological responses. Alternatively spliced transcript variants that encode the same protein have been described for this gene.

Interleukin 4 (IL-4) and interferon gamma (IFNγ) suppress expression of CCR6 in langerhans cells development and interleukin 10 (IL-10) induces the expression. It can regulate immune response in inflammatory tissue.

Proinflammatory Th17 cells express CCR6 and its ligand CCL20. CCR6 influences their migration to sites of inflammation. Some Th17 cells migrate via chemokine gradient of CCL20 to inflammatory sites and themselves can express more CCL20 to bring in more Th17 cells and regulatory T-cells (Treg). This can lead to chronic inflammation. In some models, the lack of CCR6 leads to less severe autoimmune encephalomyelitis.

Clinical significance

CCR6 has a function in development and metastatic spread of gastrointestinal malignancies. Expression of CCR6 was found to be up-regulated in colorectal cancer. Many patients with colorectal cancer have liver metastases. Colorectal carcinoma cells express CCR6 and CCL20. High level of CCL20 in liver chemoattract colorectal carcinoma cells and cause metastases in liver. Novel research has identified a microRNA that is able to downregulate CCR6 in cancer cell lines.

CCR6 has been associated with Crohn's disease.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000112486Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000040899Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Zaballos A, Varona R, Gutiérrez J, Lind P, Márquez G (October 1996). "Molecular cloning and RNA expression of two new human chemokine receptor-like genes". Biochemical and Biophysical Research Communications. 227 (3): 846–853. doi:10.1006/bbrc.1996.1595. PMID 8886020.
  6. Schutyser E, Struyf S, Van Damme J (October 2003). "The CC chemokine CCL20 and its receptor CCR6". Cytokine & Growth Factor Reviews. 14 (5): 409–426. doi:10.1016/s1359-6101(03)00049-2. PMID 12948524.
  7. ^ Frick VO, Rubie C, Keilholz U, Ghadjar P (January 2016). "Chemokine/chemokine receptor pair CCL20/CCR6 in human colorectal malignancy: An overview". World Journal of Gastroenterology. 22 (2): 833–841. doi:10.3748/wjg.v22.i2.833. PMC 4716081. PMID 26811629.
  8. Dieu MC, Vanbervliet B, Vicari A, Bridon JM, Oldham E, Aït-Yahia S, et al. (July 1998). "Selective recruitment of immature and mature dendritic cells by distinct chemokines expressed in different anatomic sites". The Journal of Experimental Medicine. 188 (2): 373–386. doi:10.1084/jem.188.2.373. PMC 2212459. PMID 9670049.
  9. "Entrez Gene: CCR6 chemokine (C-C motif) receptor 6".
  10. Dieu-Nosjean MC, Massacrier C, Vanbervliet B, Fridman WH, Caux C (November 2001). "IL-10 induces CCR6 expression during Langerhans cell development while IL-4 and IFN-gamma suppress it". Journal of Immunology. 167 (10): 5594–5602. doi:10.4049/jimmunol.167.10.5594. PMID 11698430.
  11. Yamazaki T, Yang XO, Chung Y, Fukunaga A, Nurieva R, Pappu B, et al. (December 2008). "CCR6 regulates the migration of inflammatory and regulatory T cells". Journal of Immunology. 181 (12): 8391–8401. doi:10.4049/jimmunol.181.12.8391. PMC 2752441. PMID 19050256.
  12. Rubie C, Kruse B, Frick VO, Kölsch K, Ghadjar P, Wagner M, et al. (February 2014). "Chemokine receptor CCR6 expression is regulated by miR-518a-5p in colorectal cancer cells". Journal of Translational Medicine. 12: 48. doi:10.1186/1479-5876-12-48. PMC 3996063. PMID 24559209.
  13. Frick VO, Rubie C, Kölsch K, Wagner M, Ghadjar P, Graeber S, et al. (September 2013). "CCR6/CCL20 chemokine expression profile in distinct colorectal malignancies". Scandinavian Journal of Immunology. 78 (3): 298–305. doi:10.1111/sji.12087. PMID 23790181. S2CID 45126701.
  14. Rubie C, Kruse B, Frick VO, Kölsch K, Ghadjar P, Wagner M, et al. (February 2014). "Chemokine receptor CCR6 expression is regulated by miR-518a-5p in colorectal cancer cells". Journal of Translational Medicine. 12: 48. doi:10.1186/1479-5876-12-48. PMC 3996063. PMID 24559209.
  15. Wang K, Zhang H, Kugathasan S, Annese V, Bradfield JP, Russell RK, et al. (March 2009). "Diverse genome-wide association studies associate the IL12/IL23 pathway with Crohn Disease". American Journal of Human Genetics. 84 (3): 399–405. doi:10.1016/j.ajhg.2009.01.026. PMC 2668006. PMID 19249008.

External links

Further reading

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

Cytokine receptors
Chemokine receptor
(GPCRs)
CC
CXC
Other
TNF receptor
1-10
11-20
21-27
JAK-STAT
Type I
γ-chain
β-chain
gp130
IL12RB1
Other
Type II
Ig superfamily
IL 17 family
Enzyme-linked receptor
Proteins: clusters of differentiation (see also list of human clusters of differentiation)
1–50
51–100
101–150
151–200
201–250
251–300
301–350
Chemokine receptor modulators
CC
CCR1
CCR2
CCR3
CCR4
CCR5
CCR6
CCR7
CCR8
CCR9
CCR10
CCR11
Ungrouped
CXC
CXCR1
(IL-8Rα)
CXCR2
(IL-8Rβ)
CXCR3
CXCR4
CXCR5
CXCR6
CXCR7
C (XC)
XCR1
CX3C
CX3CR1
Others
CCBP2
CMKLR1
Stub icon

This transmembrane receptor-related article is a stub. You can help Misplaced Pages by expanding it.

Categories:
C-C chemokine receptor type 6 Add topic