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SELENON

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(Redirected from SEPN1) Protein-coding gene in the species Homo sapiens
SELENON
Identifiers
AliasesSELENON, CFTD, MDRS1, RSMD1, RSS, SELN, SEPN1, selenoprotein N, 1, selenoprotein N
External IDsOMIM: 606210; MGI: 2151208; HomoloGene: 10723; GeneCards: SELENON; OMA:SELENON - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)
Chromosome 1 (human)Genomic location for SELENONGenomic location for SELENON
Band1p36.11Start25,800,193 bp
End25,818,221 bp
Gene location (Mouse)
Chromosome 4 (mouse)
Chr.Chromosome 4 (mouse)
Chromosome 4 (mouse)Genomic location for SELENONGenomic location for SELENON
Band4|4 D3Start134,265,203 bp
End134,279,477 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • stromal cell of endometrium

  • ventricular zone

  • ganglionic eminence

  • apex of heart

  • smooth muscle tissue

  • right lobe of thyroid gland

  • gastric mucosa

  • left lobe of thyroid gland

  • right ovary

  • upper lobe of left lung
Top expressed in
  • granulocyte

  • external carotid artery

  • internal carotid artery

  • interventricular septum

  • molar

  • atrium

  • Gonadal ridge

  • dermis

  • mandibular prominence

  • maxillary prominence
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

57190

74777

Ensembl

ENSG00000162430

ENSMUSG00000050989

UniProt

Q9NZV5

D3Z2R5

RefSeq (mRNA)

NM_206926
NM_020451

NM_029100

RefSeq (protein)

NP_065184
NP_996809

NP_083376

Location (UCSC)Chr 1: 25.8 – 25.82 MbChr 4: 134.27 – 134.28 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Selenoprotein N is a protein that in humans is encoded by the SEPN1 gene.

Function

This gene encodes a selenoprotein, which contains a selenocysteine (Sec) residue at its active site. The selenocysteine is encoded by the UGA codon that normally signals translation termination. The 3' UTR of selenoprotein genes have a common stem-loop structure, the sec insertion sequence (SECIS), that is necessary for the recognition of UGA as a Sec codon rather than as a stop signal. Pathogenic Mutations in SEPN1 gene (SELENON) can cause the classical phenotype of multiminicore disease and congenital muscular dystrophy with spinal rigidity and restrictive respiratory syndrome known as SEPN1-related congenital muscular dystrophy or rigid spine syndrome. Two alternatively spliced transcript variants encoding distinct isoforms have been found for this gene.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000162430Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000050989Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Lescure A, Gautheret D, Carbon P, Krol A (Dec 1999). "Novel selenoproteins identified in silico and in vivo by using a conserved RNA structural motif". The Journal of Biological Chemistry. 274 (53): 38147–54. doi:10.1074/jbc.274.53.38147. PMID 10608886.
  6. ^ "Entrez Gene: SEPN1 selenoprotein N, 1".

Further reading

External links

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