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{{Infobox software |
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{{Infobox software |
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| name = tomviz.com |
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| name = tomviz.com |
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| website = {{url|http://www.tomviz.com/}} |
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| website = {{url|www.tomviz.org}} |
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| caption = volumetric visualization of scientific data |
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| status = Active |
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| released = {{Start date and age|2014}} |
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| caption = volumetric visualization of scientific data |
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| latest_release_version = 1.10.0 |
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| released = {{Start date and age|2014}} |
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| operating_system = {{unbulleted list|]|]|]}} |
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| latest_release_version = 0.9.1 <ref name="tomviz0.9.1"/> |
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| language = English |
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| operating_system = ], ], ] |
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| license = ] |
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| language = English |
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| license = ] |
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'''tomviz''' is an ] software platform for reproducible volumetric visualization and data processing.<ref name="opensource.com"/> The platform is tailored to high-resolution ], with features that allow alignment and reconstruction of ]. Current version is 0.9.1.<ref name="tomviz0.9.0"/><ref name="tomviz0.9.1"/> |
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'''tomviz''' is an ] software platform for reproducible volumetric visualization and data processing.<ref name="opensource.com"/> The platform is designed for a wide range scientific applications but is especially tailored to high-resolution ], with features that allow alignment and reconstruction of ]. The tomviz platform allows graphical analysis of 3D datasets, but also comes packaged with ], ], and ] tools to allow advanced data processing and analysis. Current version is 1.10.0.<ref name="tomvizDownload" /> |
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In 2022 the tomviz platform was used to enable 3D visualization of specimens during an electron or cryo-electron tomography experiment.<ref name="natcom" /> Tomviz is built with multi-threaded data analysis pipeline runs dynamic visualizations that update as new data is collected or reconstruction algorithms proceed. Scientists can interactively analyse 3D specimen structure concurrent with a tomographic reconstruction after or during an experiment. |
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==References== |
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==References== |
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<references> |
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<ref name="opensource.com">{{cite web |
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<ref name="natcom">{{cite journal |
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|title=Real-time 3D analysis during electron tomography using tomviz |
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|last1=Hovden |
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|first1=Robert |
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|date=1 August 2022 |
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|journal= Nature Communications|volume=13 |
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|issue=1 |
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|page=4458 |
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|doi=10.1038/s41467-022-32046-0 |
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|pmid=35915070 |
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|s2cid=251254217 |
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|pmc=9343612|arxiv=2208.01850 |
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|bibcode=2022NatCo..13.4458S |
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}} |
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</ref> |
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<ref name="opensource.com">{{cite web |
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|url=https://opensource.com/life/14/9/visualize-nanotechnology-3D-open-source-software |
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|url=https://opensource.com/life/14/9/visualize-nanotechnology-3D-open-source-software |
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|title=Visualizing nanotechnology in 3D with open source software |
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|title=Visualizing nanotechnology in 3D with open source software |
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|date=22 September 2014 |
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|date=22 September 2014 |
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|publisher= OpenSource.com}} |
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|publisher= OpenSource.com}} |
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<ref name="tomviz0.9.0">{{cite web |
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<ref name="tomvizDownload">{{cite web |
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|url= https://blog.kitware.com/tomviz-0-9-0-released/ |
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|url= https://tomviz.org/downloads/ |
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|title=Tomviz 0.9.0 Released and M&M 2016 |
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|title=Tomviz download page |
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|author= Marcus D. Hanwell |
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|date= February 8, 2021 |
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|date= July 28, 2016 |
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|publisher= Kitware}} |
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</ref> |
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|publisher= Kitware Blog}} |
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</ref> |
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<ref name="tomviz0.9.1">{{cite web |
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|url= https://blog.kitware.com/segmentation-and-analysis-features-in-tomviz/ |
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|title=New segmentation and analysis features coming to Tomviz |
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|author1= Cory Quammen |
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|author2= Marcus D. Hanwell |
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|date= September 22, 2016 |
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|publisher= Kitware Blog}} |
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</ref> |
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</references> |
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</references> |
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{{Image processing software}} |
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In 2022 the tomviz platform was used to enable 3D visualization of specimens during an electron or cryo-electron tomography experiment. Tomviz is built with multi-threaded data analysis pipeline runs dynamic visualizations that update as new data is collected or reconstruction algorithms proceed. Scientists can interactively analyse 3D specimen structure concurrent with a tomographic reconstruction after or during an experiment.
