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DLG1

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Protein-coding gene in the species Homo sapiens
DLG1
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1PDR, 2M3M, 2OQS, 2X7Z, 3RL7, 3RL8, 3W9Y, 4AMH, 4G69

Identifiers
AliasesDLG1, DLGH1, SAP-97, SAP97, dJ1061C18.1.1, hdlg, B130052P05Rik, E-dlg/SAP97, mKIAA4187, discs large homolog 1, scribble cell polarity complex component, discs large MAGUK scaffold protein 1
External IDsOMIM: 601014; MGI: 107231; HomoloGene: 20869; GeneCards: DLG1; OMA:DLG1 - orthologs
Gene location (Human)
Chromosome 3 (human)
Chr.Chromosome 3 (human)
Chromosome 3 (human)Genomic location for DLG1Genomic location for DLG1
Band3q29Start197,042,560 bp
End197,299,330 bp
Gene location (Mouse)
Chromosome 16 (mouse)
Chr.Chromosome 16 (mouse)
Chromosome 16 (mouse)Genomic location for DLG1Genomic location for DLG1
Band16 B2|16 22.4 cMStart31,482,261 bp
End31,693,947 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • endothelial cell

  • corpus callosum

  • dorsal motor nucleus of vagus nerve

  • inferior olivary nucleus

  • inferior ganglion of vagus nerve

  • subthalamic nucleus

  • epithelium of colon

  • hair follicle

  • external globus pallidus

  • Brodmann area 23
Top expressed in
  • tail of embryo

  • globus pallidus

  • medullary collecting duct

  • vestibular membrane of cochlear duct

  • primary motor cortex

  • conjunctival fornix

  • olfactory tubercle

  • Paneth cell

  • utricle

  • condyle
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

1739

13383

Ensembl

ENSG00000075711

ENSMUSG00000022770

UniProt

Q12959

Q811D0

RefSeq (mRNA)
NM_001098424
NM_001204386
NM_001204387
NM_001204388
NM_001290983

NM_004087
NM_001363865
NM_001366203
NM_001366204
NM_001366205
NM_001366206
NM_001366207
NM_001366208
NM_001366209
NM_001366210
NM_001366211
NM_001366212
NM_001366213
NM_001366214
NM_001366215
NM_001366216
NM_001366217
NM_001366218
NM_001366219
NM_001366220
NM_001366221
NM_001366222

NM_001252433
NM_001252434
NM_001252435
NM_001252436
NM_007862

NM_001357281
NM_001357282

RefSeq (protein)
NP_001091894
NP_001191315
NP_001191316
NP_001191317
NP_001277912

NP_004078
NP_001350794
NP_001353132
NP_001353133
NP_001353134
NP_001353135
NP_001353136
NP_001353137
NP_001353138
NP_001353139
NP_001353140
NP_001353141
NP_001353142
NP_001353143
NP_001353144
NP_001353145
NP_001353146
NP_001353147
NP_001353148
NP_001353149
NP_001353150
NP_001353151

NP_001239362
NP_001239363
NP_001239364
NP_001239365
NP_031888

NP_001344210
NP_001344211

Location (UCSC)Chr 3: 197.04 – 197.3 MbChr 16: 31.48 – 31.69 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Discs large homolog 1 (DLG1), also known as synapse-associated protein 97 or SAP97, is a scaffold protein that in humans is encoded by the SAP97 gene.

SAP97 is a mammalian MAGUK-family member protein that is similar to the Drosophila protein Dlg1 (the protein is alternatively referred to as hDlg1, and the human gene is DLG1). SAP97 is expressed throughout the body in epithelial cells. In the brain it is involved in the trafficking of ionotropic receptors from the endoplasmic reticulum to the plasma membrane, and may be involved in the trafficking AMPAR during synaptic plasticity.

Function

SAP97 is expressed throughout the body in epithelial cells, including the kidney and brain. There is some evidence that SAP97 regulates cell-to-cell adhesion during cell death, and may interact with HPV. In the brain, SAP97's function is involved in the trafficking of transmembrane receptors from the ER to the plasma membrane.

SAP97's function has been investigated by reducing its expression by knockout or increasing its expression heterologously. Mice in which the SAP97 gene has been knocked out die perinatally, have a cleft palate, and deficiencies in renal function. Overexpression of SAP97 in mammalian neurons leads to increased synaptic strength.

Clinical significance

Mutations in DLG1 are associated to Crohn's disease.

Structure

SAP97's protein structure consists of an alternatively-spliced N-terminal domain, three PDZ domains, an SH3 domain, hook domain, I3 domain, and finally an inactive guanylate kinase (GK) domain. Each of these domains has specific interacting partners that help define SAP97's unique function.

The N-terminal of SAP97 can be alternatively spliced to contain a double-cysteine/palmitoylation site (α-isoform), or an L27 domain (β-isoform. The L27 domain is involved in SAP97 oligomerization with other SAP97 molecules, CASK, and other L27-domain-containing proteins. There is also a myosin VI binding site near N-terminal which may be involved in the internalization of AMPAR.

Each of SAP97's PDZ domains have different binding partners, including the AMPAR subunit GluR1 for the first PDZ domain, and neuroligin for the last. SAP97's I3 domain is unique to SAP97 among the MAGUK family, and is known to regulate the post-synaptic localization of SAP97 and to bind the protein 4.1N. The GK domain allows SAP97 to bind to GKAP/SAPAP-family proteins.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000075711Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000022770Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Müller BM, Kistner U, Veh RW, Cases-Langhoff C, Becker B, Gundelfinger ED, Garner CC (Mar 1995). "Molecular characterization and spatial distribution of SAP97, a novel presynaptic protein homologous to SAP90 and the Drosophila discs-large tumor suppressor protein". The Journal of Neuroscience. 15 (3 Pt 2): 2354–66. doi:10.1523/JNEUROSCI.15-03-02354.1995. PMC 6578138. PMID 7891172.
  6. Sans N, Racca C, Petralia RS, Wang YX, McCallum J, Wenthold RJ (Oct 2001). "Synapse-associated protein 97 selectively associates with a subset of AMPA receptors early in their biosynthetic pathway". The Journal of Neuroscience. 21 (19): 7506–16. doi:10.1523/JNEUROSCI.21-19-07506.2001. PMC 6762903. PMID 11567040.
  7. Caruana G, Bernstein A (Mar 2001). "Craniofacial dysmorphogenesis including cleft palate in mice with an insertional mutation in the discs large gene". Molecular and Cellular Biology. 21 (5): 1475–83. doi:10.1128/MCB.21.5.1475-1483.2001. PMC 86693. PMID 11238884.
  8. Mahoney ZX, Sammut B, Xavier RJ, Cunningham J, Go G, Brim KL, Stappenbeck TS, Miner JH, Swat W (Dec 2006). "Discs-large homolog 1 regulates smooth muscle orientation in the mouse ureter". Proceedings of the National Academy of Sciences of the United States of America. 103 (52): 19872–7. Bibcode:2006PNAS..10319872M. doi:10.1073/pnas.0609326103. PMC 1750896. PMID 17172448.
  9. ^ Rumbaugh G, Sia GM, Garner CC, Huganir RL (Jun 2003). "Synapse-associated protein-97 isoform-specific regulation of surface AMPA receptors and synaptic function in cultured neurons". The Journal of Neuroscience. 23 (11): 4567–76. doi:10.1523/JNEUROSCI.23-11-04567.2003. PMC 6740810. PMID 12805297.
  10. Xu S, Zhou F, Tao J, Song L, Ng SC, Wang X, Chen L, Yi F, Ran Z, Zhou R, Xia B (2014). "Exome sequencing identifies DLG1 as a novel gene for potential susceptibility to Crohn's disease in a Chinese family study". PLOS ONE. 9 (6): e99807. Bibcode:2014PLoSO...999807X. doi:10.1371/journal.pone.0099807. PMC 4061034. PMID 24937328.
  11. Lee S, Fan S, Makarova O, Straight S, Margolis B (Mar 2002). "A novel and conserved protein-protein interaction domain of mammalian Lin-2/CASK binds and recruits SAP97 to the lateral surface of epithelia". Molecular and Cellular Biology. 22 (6): 1778–91. doi:10.1128/MCB.22.6.1778-1791.2002. PMC 135599. PMID 11865057.
  12. Wu H, Nash JE, Zamorano P, Garner CC (Aug 2002). "Interaction of SAP97 with minus-end-directed actin motor myosin VI. Implications for AMPA receptor trafficking". The Journal of Biological Chemistry. 277 (34): 30928–34. doi:10.1074/jbc.M203735200. PMID 12050163.
  13. Osterweil E, Wells DG, Mooseker MS (Jan 2005). "A role for myosin VI in postsynaptic structure and glutamate receptor endocytosis". The Journal of Cell Biology. 168 (2): 329–38. doi:10.1083/jcb.200410091. PMC 2171578. PMID 15657400.
  14. Leonard AS, Davare MA, Horne MC, Garner CC, Hell JW (Jul 1998). "SAP97 is associated with the alpha-amino-3-hydroxy-5-methylisoxazole-4-propionic acid receptor GluR1 subunit". The Journal of Biological Chemistry. 273 (31): 19518–24. doi:10.1074/jbc.273.31.19518. PMID 9677374.
  15. Cai C, Coleman SK, Niemi K, Keinänen K (Aug 2002). "Selective binding of synapse-associated protein 97 to GluR-A alpha-amino-5-hydroxy-3-methyl-4-isoxazole propionate receptor subunit is determined by a novel sequence motif". The Journal of Biological Chemistry. 277 (35): 31484–90. doi:10.1074/jbc.M204354200. PMID 12070168.

Further reading

External links

PDB gallery
  • 1iu0: The first PDZ domain of PSD-95 1iu0: The first PDZ domain of PSD-95
  • 1iu2: The first PDZ domain of PSD-95 1iu2: The first PDZ domain of PSD-95
  • 1kef: PDZ1 of SAP90 1kef: PDZ1 of SAP90
  • 1pdr: CRYSTAL STRUCTURE OF THE THIRD PDZ DOMAIN FROM THE HUMAN HOMOLOG OF DISCS LARGE PROTEIN 1pdr: CRYSTAL STRUCTURE OF THE THIRD PDZ DOMAIN FROM THE HUMAN HOMOLOG OF DISCS LARGE PROTEIN
  • 1rgr: Cyclic Peptides Targeting PDZ Domains of PSD-95: Structural Basis for Enhanced Affinity and Enzymatic Stability 1rgr: Cyclic Peptides Targeting PDZ Domains of PSD-95: Structural Basis for Enhanced Affinity and Enzymatic Stability
  • 1rso: Hetero-tetrameric L27 (Lin-2, Lin-7) domain complexes as organization platforms of supra-molecular assemblies 1rso: Hetero-tetrameric L27 (Lin-2, Lin-7) domain complexes as organization platforms of supra-molecular assemblies
  • 1zok: PDZ1 Domain Of Synapse Associated Protein 97 1zok: PDZ1 Domain Of Synapse Associated Protein 97
  • 2awu: Synapse associated protein 97 PDZ2 domain variant C378G 2awu: Synapse associated protein 97 PDZ2 domain variant C378G
  • 2aww: Synapse associated protein 97 PDZ2 domain variant C378G with C-terminal GluR-A peptide 2aww: Synapse associated protein 97 PDZ2 domain variant C378G with C-terminal GluR-A peptide
  • 2awx: Synapse associated protein 97 PDZ2 domain variant C378S 2awx: Synapse associated protein 97 PDZ2 domain variant C378S
  • 2g2l: Crystal Structure of the Second PDZ Domain of SAP97 in Complex with a GluR-A C-terminal Peptide 2g2l: Crystal Structure of the Second PDZ Domain of SAP97 in Complex with a GluR-A C-terminal Peptide
  • 2i0i: X-ray crystal structure of Sap97 PDZ3 bound to the C-terminal peptide of HPV18 E6 2i0i: X-ray crystal structure of Sap97 PDZ3 bound to the C-terminal peptide of HPV18 E6
  • 2i0l: X-ray crystal structure of Sap97 PDZ2 bound to the C-terminal peptide of HPV18 E6. 2i0l: X-ray crystal structure of Sap97 PDZ2 bound to the C-terminal peptide of HPV18 E6.
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