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SPECC1

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Protein-coding gene in the species Homo sapiens
SPECC1
Identifiers
AliasesSPECC1, CYTSB, HCMOGT-1, HCMOGT1, NSP, sperm antigen with calponin homology and coiled-coil domains 1, NSP5
External IDsOMIM: 608793; MGI: 2442356; HomoloGene: 45157; GeneCards: SPECC1; OMA:SPECC1 - orthologs
Gene location (Human)
Chromosome 17 (human)
Chr.Chromosome 17 (human)
Chromosome 17 (human)Genomic location for SPECC1Genomic location for SPECC1
Band17p11.2Start20,008,865 bp
End20,319,026 bp
Gene location (Mouse)
Chromosome 11 (mouse)
Chr.Chromosome 11 (mouse)
Chromosome 11 (mouse)Genomic location for SPECC1Genomic location for SPECC1
Band11|11 B2Start61,847,589 bp
End62,113,839 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • Achilles tendon

  • corpus callosum

  • C1 segment

  • sural nerve

  • testicle

  • globus pallidus

  • internal globus pallidus

  • external globus pallidus

  • substantia nigra

  • gonad
Top expressed in
  • blood

  • molar

  • motor neuron

  • fetal liver hematopoietic progenitor cell

  • lumbar subsegment of spinal cord

  • superior colliculus

  • inferior colliculi

  • cerebellar cortex

  • anterior horn of spinal cord

  • deep cerebellar nuclei
More reference expression data
BioGPS
n/a
Orthologs
SpeciesHumanMouse
Entrez

92521

432572

Ensembl

ENSG00000128487

ENSMUSG00000042331

UniProt

Q5M775

Q5SXY1

RefSeq (mRNA)
NM_001033553
NM_001033554
NM_001033555
NM_001243438
NM_001243439

NM_152904
NM_001386077
NM_001386078
NM_001386079
NM_001386080
NM_001386081
NM_001386082
NM_001386083
NM_001386084
NM_001386085

NM_001029936
NM_001281818
NM_001310526

RefSeq (protein)
NP_001028725
NP_001028726
NP_001028727
NP_001230367
NP_001230368

NP_690868

NP_001025107
NP_001268747
NP_001297455

Location (UCSC)Chr 17: 20.01 – 20.32 MbChr 11: 61.85 – 62.11 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Cytospin-B is a protein that, in humans, is encoded by the CYTSB gene.


References

  1. ^ GRCh38: Ensembl release 89: ENSG00000128487Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000042331Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Sang N, Fath DM, Giordano A (Dec 2004). "A gene highly expressed in tumor cells encodes novel structure proteins". Oncogene. 23 (58): 9438–46. doi:10.1038/sj.onc.1207988. PMC 4518866. PMID 15602574.
  6. D'Agostino L, Giordano A (Aug 2008). "Possible functional role of NSPs in cancer". Cell Cycle. 7 (12): 1810–27. doi:10.4161/cc.7.12.6023. PMID 18763323.
  7. Morerio C, Acquila M, Rosanda C, Rapella A, Dufour C, Locatelli F, Maserati E, Pasquali F, Panarello C (Apr 2004). "HCMOGT-1 is a novel fusion partner to PDGFRB in juvenile myelomonocytic leukemia with t(5;17)(q33;p11.2)". Cancer Res. 64 (8): 2649–51. doi:10.1158/0008-5472.CAN-03-4026. PMID 15087372.
  8. "Entrez Gene: SPECC1 sperm antigen with calponin homology and coiled-coil domains 1".

Further reading


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