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mir-BART1 microRNA precursor family

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mir-BART1 microRNA precursor family
Predicted secondary structure and sequence conservation of mir-BART1
Identifiers
Symbolmir-BART1
RfamRF00363
miRBaseMI0001067
miRBase familyMIPF0000325
Other data
RNA typeGene; miRNA
Domain(s)Viruses
GOGO:0035195 GO:0035068
SOSO:0001244
PDB structuresPDBe

The mir-BART1 microRNA precursor is found in Human herpesvirus 4 (Epstein–Barr virus) and Cercopithicine herpesvirus 15. mir-BART1 is found in all stages of infection but expression is significantly elevated in the lytic stage. In Epstein-Barr virus, mir-BART1 is found in the intronic regions of the BART (Bam HI-A region rightward transcript) gene whose function is unknown. The mature sequence is excised from the 5' arm of the hairpin.

References

  1. Qureshi A, Thakur N, Monga I, Thakur A, Kumar M (1 January 2014). "VIRmiRNA: a comprehensive resource for experimentally validated viral miRNAs and their targets". Database. 2014: bau103. doi:10.1093/database/bau103. PMC 4224276. PMID 25380780.
  2. Pfeffer S, Zavolan M, Grässer FA, Chien M, Russo JJ, Ju J, John B, Enright AJ, Marks D, Sander C, Tuschl T (April 2004). "Identification of virus-encoded microRNAs". Science. 304 (5671): 734–6. doi:10.1126/science.1096781. PMID 15118162. S2CID 25287167.

External links


miRNA precursor families
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