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The name Ornithocheiroidea was originally defined as an apomorphy-based taxon by Christopher Bennett in 1994. It was given a relationship-based definition in 2003 by Alexander Kellner, who defined it as the least inclusive clade containing Anhanguera blittersdorffi, Pteranodon longiceps, Dsungaripterus weii, and Quetzalcoatlus northropi. Later that year, David Unwin suggested a more restrictive definition, in which the clade only contains Pteranodon longiceps, Istiodactylus latidens, and their descentants. Brian Andres (2008, 2010, 2014) in his analyses, defined Ornithocheiroidea using the definition of Kellner (2003) to avoid confusion with similarly-defined groups, like Pteranodontoidea.
Below is a cladogram showing the results of a phylogenetic analysis presented by Longrich and colleagues in 2018. They found Ornithocheiroidea to consist of the clades Pteranodontoidea and Azhdarchoidea, as well as the genus Piksi.
In 2019, a phylogenetic analysis conducted by Kellner and colleagues had recovered Ornithocheiroidea as the sister taxon of the Archaeopterodactyloidea, and consisting of the clades Tapejaroidea and Pteranodontoidea. Several recent studies have followed this or a similar concept. The cladogram of the analysis by Kellner and colleagues is presented below:
Unwin, David M.; Heinrich, Wolf-Dieter (1999). "On a pterosaur jaw from the Upper Jurassic of Tendaguru (Tanzania)". Mitteilungen aus dem Museum für Naturkunde in Berlin, Geowissenschaftliche Reihe. 2: 121–134.
Kellner, A. W. A., (2003): Pterosaur phylogeny and comments on the evolutionary history of the group. pp. 105-137. — in Buffetaut, E. & Mazin, J.-M., (eds.): Evolution and Palaeobiology of Pterosaurs. Geological Society of London, Special Publications 217, London, 1-347
Unwin, D. M., (2003): On the phylogeny and evolutionary history of pterosaurs. pp. 139-190. — in Buffetaut, E. & Mazin, J.-M., (eds.): Evolution and Palaeobiology of Pterosaurs. Geological Society of London, Special Publications 217, London, 1-347 doi:10.1144/GSL.SP.2003.217.01.11
Borja Holgado, Rodrigo V. Pêgas, José Ignacio Canudo, Josep Fortuny, Taissa Rodrigues, Julio Company & Alexander W.A. Kellner, 2019, "On a new crested pterodactyloid from the Early Cretaceous of the Iberian Peninsula and the radiation of the clade Anhangueria", Scientific Reports9: 4940 doi:10.1038/s41598-019-41280-4
