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SSH1

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Protein-coding gene in the species Homo sapiens
SSH1
Identifiers
AliasesSSH1, SSH1L, slingshot protein phosphatase 1
External IDsOMIM: 606778; MGI: 2686240; HomoloGene: 41299; GeneCards: SSH1; OMA:SSH1 - orthologs
Gene location (Human)
Chromosome 12 (human)
Chr.Chromosome 12 (human)
Chromosome 12 (human)Genomic location for SSH1Genomic location for SSH1
Band12q24.11Start108,778,191 bp
End108,857,590 bp
Gene location (Mouse)
Chromosome 5 (mouse)
Chr.Chromosome 5 (mouse)
Chromosome 5 (mouse)Genomic location for SSH1Genomic location for SSH1
Band5|5 FStart114,075,155 bp
End114,131,955 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • sural nerve

  • stromal cell of endometrium

  • saphenous vein

  • secondary oocyte

  • trigeminal ganglion

  • lower lobe of lung

  • lactiferous duct

  • tail of epididymis

  • spinal ganglia

  • caput epididymis
Top expressed in
  • internal carotid artery

  • Rostral migratory stream

  • external carotid artery

  • sciatic nerve

  • substantia nigra

  • fossa

  • blood

  • Gonadal ridge

  • ciliary body

  • cumulus cell
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

54434

231637

Ensembl

ENSG00000084112

ENSMUSG00000042121

UniProt

Q8WYL5

Q76I79

RefSeq (mRNA)

NM_001161330
NM_001161331
NM_018984

NM_198109
NM_001363469

RefSeq (protein)

NP_001154802
NP_001154803
NP_061857

NP_932777
NP_001350398

Location (UCSC)Chr 12: 108.78 – 108.86 MbChr 5: 114.08 – 114.13 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

For the SSH-1 protocol, see Secure Shell#Version 1

Protein phosphatase Slingshot homolog 1 is an enzyme that in humans is encoded by the SSH1 gene.

The ADF (actin-depolymerizing factor)/cofilin family (see MIM 601442) is composed of stimulus-responsive mediators of actin dynamics. ADF/cofilin proteins are inactivated by kinases such as LIM domain kinase-1 (LIMK1; MIM 601329). The SSH family appears to play a role in actin dynamics by reactivating ADF/cofilin proteins in vivo (Niwa et al., 2002).

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000084112Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000042121Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Nagase T, Kikuno R, Ishikawa KI, Hirosawa M, Ohara O (Apr 2000). "Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro". DNA Res. 7 (1): 65–73. doi:10.1093/dnares/7.1.65. PMID 10718198.
  6. Niwa R, Nagata-Ohashi K, Takeichi M, Mizuno K, Uemura T (Feb 2002). "Control of actin reorganization by Slingshot, a family of phosphatases that dephosphorylate ADF/cofilin". Cell. 108 (2): 233–46. doi:10.1016/S0092-8674(01)00638-9. PMID 11832213. S2CID 5576208.
  7. ^ "Entrez Gene: SSH1 slingshot homolog 1 (Drosophila)".

Further reading

Esterase: protein tyrosine phosphatases (EC 3.1.3.48)
Class I
Classical PTPs
Receptor type PTPs
Non receptor type PTPs
VH1-like or
dual specific
phosphatases

(DSPs)
MAPK phosphatases (MKPs)
Slingshots
PRLs
CDC14s
Atypical DSPs
Phosphatase and tensin
homologs (PTENs)
Myotubularins
Class II
Class III
Class IV
Stub icon

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