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BARHL2

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Protein-coding gene in the species Homo sapiens
BARHL2
Identifiers
AliasesBARHL2, BarH like homeobox 2
External IDsOMIM: 605212; MGI: 1859314; HomoloGene: 10572; GeneCards: BARHL2; OMA:BARHL2 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)
Chromosome 1 (human)Genomic location for BARHL2Genomic location for BARHL2
Band1p22.2Start90,711,539 bp
End90,717,302 bp
Gene location (Mouse)
Chromosome 5 (mouse)
Chr.Chromosome 5 (mouse)
Chromosome 5 (mouse)Genomic location for BARHL2Genomic location for BARHL2
Band5|5 E5Start106,600,389 bp
End106,606,032 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • Cerebellum

  • cerebellar cortex

  • cerebellar hemisphere

  • right hemisphere of cerebellum

  • gonad

  • testicle

  • right testis

  • left testis

  • Hypothalamus

  • C1 segment
Top expressed in
  • internal carotid artery

  • external carotid artery

  • Cerebellum

  • cerebellar cortex

  • epithelium of small intestine

  • neural layer of retina

  • knee joint

  • pineal gland

  • lobe of cerebellum

  • posterior horn of spinal cord
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

343472

104382

Ensembl

ENSG00000143032

ENSMUSG00000034384

UniProt

Q9NY43

Q8VIB5

RefSeq (mRNA)

NM_020063

NM_001005477

RefSeq (protein)

NP_064447

NP_001005477

Location (UCSC)Chr 1: 90.71 – 90.72 MbChr 5: 106.6 – 106.61 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

BarH-like homeobox 2 is a protein in humans that is encoded by the BARHL2 gene.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000143032 – Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000034384 – Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. "Entrez Gene: BarH-like homeobox 2". Retrieved 2013-01-04.

Further reading

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Transcription factors and intracellular receptors
(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies
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