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PBX2

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Protein found in humans
PBX2
Identifiers
AliasesPBX2, G17, HOX12, PBX2MHC, PBX homeobox 2
External IDsOMIM: 176311; MGI: 1341793; HomoloGene: 48115; GeneCards: PBX2; OMA:PBX2 - orthologs
Gene location (Human)
Chromosome 6 (human)
Chr.Chromosome 6 (human)
Chromosome 6 (human)Genomic location for PBX2Genomic location for PBX2
Band6p21.32Start32,184,733 bp
End32,190,202 bp
Gene location (Mouse)
Chromosome 17 (mouse)
Chr.Chromosome 17 (mouse)
Chromosome 17 (mouse)Genomic location for PBX2Genomic location for PBX2
Band17|17 B1Start34,810,240 bp
End34,816,374 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • right lobe of thyroid gland

  • left lobe of thyroid gland

  • granulocyte

  • right ovary

  • spleen

  • body of uterus

  • Pituitary Gland

  • left ovary

  • anterior pituitary

  • left uterine tube
Top expressed in
  • genital tubercle

  • tail of embryo

  • granulocyte

  • mandibular prominence

  • maxillary prominence

  • somite

  • saccule

  • germ layer

  • ectoderm

  • otic vesicle
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

5089

18515

Ensembl
ENSG00000224952
ENSG00000237344
ENSG00000236353
ENSG00000232005
ENSG00000225987

ENSG00000206315
ENSG00000204304

ENSMUSG00000034673

UniProt

P40425

O35984

RefSeq (mRNA)

NM_002586

NM_017463

RefSeq (protein)

NP_002577

NP_059491

Location (UCSC)Chr 6: 32.18 – 32.19 MbChr 17: 34.81 – 34.82 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Pre-B-cell leukemia transcription factor 2 is a protein that in humans is encoded by the PBX2 gene.

Function

This gene encodes a ubiquitously expressed member of the TALE/PBX homeobox family. It was identified by its similarity to a homeobox gene which is involved in t(1;19) translocation in acute pre-B-cell leukemias. This protein is a transcriptional activator which binds to the TLX1 promoter. The gene is located within the major histocompatibility complex (MHC) on chromosome 6.

Interactions

PBX2 has been shown to interact with HOXA9.

References

  1. ^ ENSG00000237344, ENSG00000236353, ENSG00000232005, ENSG00000225987, ENSG00000206315, ENSG00000204304 GRCh38: Ensembl release 89: ENSG00000224952, ENSG00000237344, ENSG00000236353, ENSG00000232005, ENSG00000225987, ENSG00000206315, ENSG00000204304Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000034673Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Sugaya K, Fukagawa T, Matsumoto K, Mita K, Takahashi E, Ando A, Inoko H, Ikemura T (Sep 1994). "Three genes in the human MHC class III region near the junction with the class II: gene for receptor of advanced glycosylation end products, PBX2 homeobox gene and a notch homolog, human counterpart of mouse mammary tumor gene int-3". Genomics. 23 (2): 408–19. doi:10.1006/geno.1994.1517. PMID 7835890.
  6. ^ "Entrez Gene: PBX2 pre-B-cell leukemia homeobox 2".
  7. Shen WF, Rozenfeld S, Kwong A, Köm ves LG, Lawrence HJ, Largman C (Apr 1999). "HOXA9 forms triple complexes with PBX2 and MEIS1 in myeloid cells". Molecular and Cellular Biology. 19 (4): 3051–61. doi:10.1128/mcb.19.4.3051. PMC 84099. PMID 10082572.

Further reading

External links

PDB gallery
  • 1b72: PBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX 1b72: PBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX
  • 1b8i: STRUCTURE OF THE HOMEOTIC UBX/EXD/DNA TERNARY COMPLEX 1b8i: STRUCTURE OF THE HOMEOTIC UBX/EXD/DNA TERNARY COMPLEX
  • 1du6: SOLUTION STRUCTURE OF THE TRUNCATED PBX HOMEODOMAIN 1du6: SOLUTION STRUCTURE OF THE TRUNCATED PBX HOMEODOMAIN
  • 1lfu: NMR solution structure of the extended PBX homeodomain bound to DNA 1lfu: NMR solution structure of the extended PBX homeodomain bound to DNA
  • 1puf: Crystal structure of HoxA9 and Pbx1 homeodomains bound to DNA 1puf: Crystal structure of HoxA9 and Pbx1 homeodomains bound to DNA
Transcription factors and intracellular receptors
(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

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