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LBX1

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Protein-coding gene in the species Homo sapiens
LBX1
Identifiers
AliasesLBX1, HPX-6, HPX6, LBX1H, homeobox, ladybird homeobox 1, CCHS3
External IDsOMIM: 604255; MGI: 104867; HomoloGene: 4784; GeneCards: LBX1; OMA:LBX1 - orthologs
Gene location (Human)
Chromosome 10 (human)
Chr.Chromosome 10 (human)
Chromosome 10 (human)Genomic location for LBX1Genomic location for LBX1
Band10q24.32Start101,226,994 bp
End101,229,463 bp
Gene location (Mouse)
Chromosome 19 (mouse)
Chr.Chromosome 19 (mouse)
Chromosome 19 (mouse)Genomic location for LBX1Genomic location for LBX1
Band19|19 C3Start45,221,123 bp
End45,224,251 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • gastrocnemius muscle

  • muscle of thigh

  • testicle

  • skeletal muscle tissue

  • right hemisphere of cerebellum

  • C1 segment

  • right lung

  • Frontal Lobe

  • Cortex of frontal lobe

  • dorsolateral prefrontal cortex
Top expressed in
  • triceps brachii muscle

  • muscle of thigh

  • lumbar subsegment of spinal cord

  • ankle

  • vastus lateralis muscle

  • gastrocnemius muscle

  • tibialis anterior muscle

  • skeletal muscle tissue

  • zygote

  • soleus muscle
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

10660

16814

Ensembl

ENSG00000138136

ENSMUSG00000025216

UniProt

P52954

P52955

RefSeq (mRNA)

NM_006562

NM_010691

RefSeq (protein)

NP_006553

NP_034821

Location (UCSC)Chr 10: 101.23 – 101.23 MbChr 19: 45.22 – 45.22 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Transcription factor LBX1 is a protein that in humans is encoded by the LBX1 gene.

This gene and the orthologous mouse gene were found by their homology to the Drosophila lady bird early and late homeobox genes.

In the mouse, this gene is a key regulator of muscle precursor cell migration and is required for the acquisition of dorsal identities of forelimb muscles.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000138136Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000025216Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Jagla K, Dolle P, Mattei MG, Jagla T, Schuhbaur B, Dretzen G, Bellard F, Bellard M (Jul 1996). "Mouse Lbx1 and human LBX1 define a novel mammalian homeobox gene family related to the Drosophila lady bird genes". Mech Dev. 53 (3): 345–56. doi:10.1016/0925-4773(95)00450-5. PMID 8645601. S2CID 19021832.
  6. ^ "Entrez Gene: LBX1 ladybird homeobox 1".

Further reading

Transcription factors and intracellular receptors
(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies
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