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FHL3

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Protein-coding gene in the species Homo sapiens

FHL3
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1WYH, 2CUQ, 2EHE

Identifiers
AliasesFHL3, SLIM2, four and a half LIM domains 3
External IDsOMIM: 602790; MGI: 1341092; HomoloGene: 37928; GeneCards: FHL3; OMA:FHL3 - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)
Chromosome 1 (human)Genomic location for FHL3Genomic location for FHL3
Band1p34.3Start37,996,770 bp
End38,005,606 bp
Gene location (Mouse)
Chromosome 4 (mouse)
Chr.Chromosome 4 (mouse)
Chromosome 4 (mouse)Genomic location for FHL3Genomic location for FHL3
Band4|4 D2.2Start124,594,494 bp
End124,602,404 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • muscle of thigh

  • gastrocnemius muscle

  • Skeletal muscle tissue of rectus abdominis

  • vastus lateralis muscle

  • Skeletal muscle tissue of biceps brachii

  • thoracic diaphragm

  • triceps brachii muscle

  • deltoid muscle

  • tibialis anterior muscle

  • body of uterus
Top expressed in
  • muscle of thigh

  • lip

  • granulocyte

  • esophagus

  • genital tubercle

  • yolk sac

  • urethra

  • skeletal muscle tissue

  • embryo

  • male urethra
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2275

14201

Ensembl

ENSG00000183386

ENSMUSG00000032643

UniProt

Q13643
Q96C98

Q9R059

RefSeq (mRNA)

NM_004468
NM_001243878

NM_010213

RefSeq (protein)

NP_001230807
NP_004459
NP_001230807.1

NP_034343

Location (UCSC)Chr 1: 38 – 38.01 MbChr 4: 124.59 – 124.6 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Four and a half LIM domains protein 3 is a protein that in humans is encoded by the FHL3 gene.

LIM proteins are defined by the possession of a highly conserved double zinc finger motif called the LIM domain.

Function

FHL3 plays a role in myogenesis, and also stimulates the development of neural crest by enhancing BMP signaling.

Interactions

FHL3 has been shown to interact with:

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000183386Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000032643Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Morgan MJ, Madgwick AJ (October 1996). "Slim defines a novel family of LIM-proteins expressed in skeletal muscle". Biochem Biophys Res Commun. 225 (2): 632–8. doi:10.1006/bbrc.1996.1222. PMID 8753811.
  6. Lee SM, Tsui SK, Chan KK, Kotaka M, Li HY, Chim SS, Waye MM, Fung KP, Lee CY (May 1999). "Chromosomal mapping of a skeletal muscle specific LIM-only protein FHL3 to the distal end of the short arm of human chromosome 1". Somat Cell Mol Genet. 24 (3): 197–202. doi:10.1023/B:SCAM.0000007122.03392.4b. PMID 10226657. S2CID 40511123.
  7. ^ "Entrez Gene: FHL3 four and a half LIM domains 3".
  8. Cottle et al., J Cell Sci. 2007 Apr 15;120(Pt 8):1423-35. doi: 10.1242/jcs.004739
  9. Intracellular enhancement of BMP signaling by LIM-domain protein FHL3 controls spatiotemporal emergence of the neural crest driven by WNT signaling Mansour Alkobtawi, Patrick Pla, Anne H. Monsoro-Burq bioRxiv 711192; doi: https://doi.org/10.1101/711192
  10. ^ Fimia GM, De Cesare D, Sassone-Corsi P (November 2000). "A family of LIM-only transcriptional coactivators: tissue-specific expression and selective activation of CREB and CREM". Mol. Cell. Biol. 20 (22): 8613–22. doi:10.1128/mcb.20.22.8613-8622.2000. PMC 102166. PMID 11046156.
  11. ^ Turner J, Nicholas H, Bishop D, Matthews JM, Crossley M (April 2003). "The LIM protein FHL3 binds basic Krüppel-like factor/Krüppel-like factor 3 and its co-repressor C-terminal-binding protein 2". J. Biol. Chem. 278 (15): 12786–95. doi:10.1074/jbc.M300587200. PMID 12556451.
  12. Li HY, Ng EK, Lee SM, Kotaka M, Tsui SK, Lee CY, Fung KP, Waye MM (2001). "Protein–protein interaction of FHL3 with FHL2 and visualization of their interaction by green fluorescent proteins (GFP) two-fusion fluorescence resonance energy transfer (FRET)". J. Cell. Biochem. 80 (3): 293–303. doi:10.1002/1097-4644(20010301)80:3<293::AID-JCB10>3.0.CO;2-U. PMID 11135358. S2CID 36346381.
  13. Samson T, Smyth N, Janetzky S, Wendler O, Müller JM, Schüle R, von der Mark H, von der Mark K, Wixler V (July 2004). "The LIM-only proteins FHL2 and FHL3 interact with alpha- and beta-subunits of the muscle alpha7beta1 integrin receptor". J. Biol. Chem. 279 (27): 28641–52. doi:10.1074/jbc.M312894200. PMID 15117962.

Further reading

External links

PDB gallery
  • 1wyh: Solution structure of the LIM domain from human Skeletal muscle LIM-protein 2 1wyh: Solution structure of the LIM domain from human Skeletal muscle LIM-protein 2
  • 2cuq: Solution Structure of Second Lim Domain from Human Skeletal Muscle Lim-Protein 2 2cuq: Solution Structure of Second Lim Domain from Human Skeletal Muscle Lim-Protein 2
Transcription factors and intracellular receptors
(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies

This article incorporates text from the United States National Library of Medicine, which is in the public domain.


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