Misplaced Pages

PHF20

Article snapshot taken from Wikipedia with creative commons attribution-sharealike license. Give it a read and then ask your questions in the chat. We can research this topic together.
Protein-coding gene in the species Homo sapiens
PHF20
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

3P8D, 3Q1J, 3QII, 3SD4

Identifiers
AliasesPHF20, C20orf104, GLEA2, HCA58, NZF, TDRD20A, TZP, PHD finger protein 20
External IDsOMIM: 610335; MGI: 2444148; HomoloGene: 9507; GeneCards: PHF20; OMA:PHF20 - orthologs
Gene location (Human)
Chromosome 20 (human)
Chr.Chromosome 20 (human)
Chromosome 20 (human)Genomic location for PHF20Genomic location for PHF20
Band20q11.22-q11.23Start35,771,974 bp
End35,950,370 bp
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)
Chromosome 2 (mouse)Genomic location for PHF20Genomic location for PHF20
Band2|2 H1Start156,196,466 bp
End156,309,952 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • endothelial cell

  • sperm

  • epithelium of colon

  • Achilles tendon

  • Brodmann area 23

  • germinal epithelium

  • amniotic fluid

  • glutes

  • visceral pleura

  • parietal pleura
Top expressed in
  • zygote

  • ectoderm

  • otic placode

  • otic vesicle

  • saccule

  • primary oocyte

  • secondary oocyte

  • Region I of hippocampus proper

  • cerebellar vermis

  • lobe of cerebellum
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

51230

228829

Ensembl

ENSG00000025293

ENSMUSG00000038116

UniProt

Q9BVI0
Q5JWZ0

Q8BLG0

RefSeq (mRNA)

NM_016436

NM_172674

RefSeq (protein)

NP_057520

NP_766262

Location (UCSC)Chr 20: 35.77 – 35.95 MbChr 2: 156.2 – 156.31 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

PHD finger protein 20 is a protein that in humans is encoded by the PHF20 gene.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000025293Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000038116Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. "Entrez Gene: PHF20 PHD finger protein 20".

Further reading

External links

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

Transcription factors and intracellular receptors
(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies


Stub icon

This article on a gene on human chromosome 20 is a stub. You can help Misplaced Pages by expanding it.

Categories: