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Ets variant 5

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(Redirected from ERM transcription factor) Protein-coding gene in the species Homo sapiens
ETV5
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

4UNO

Identifiers
AliasesETV5, ERM, ETS variant 5, ETS variant transcription factor 5
External IDsOMIM: 601600; MGI: 1096867; HomoloGene: 3276; GeneCards: ETV5; OMA:ETV5 - orthologs
Gene location (Human)
Chromosome 3 (human)
Chr.Chromosome 3 (human)
Chromosome 3 (human)Genomic location for ETV5Genomic location for ETV5
Band3q27.2Start186,046,314 bp
End186,110,318 bp
Gene location (Mouse)
Chromosome 16 (mouse)
Chr.Chromosome 16 (mouse)
Chromosome 16 (mouse)Genomic location for ETV5Genomic location for ETV5
Band16|16 B1Start22,200,059 bp
End22,258,469 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • buccal mucosa cell

  • ventricular zone

  • secondary oocyte

  • ganglionic eminence

  • caput epididymis

  • Brodmann area 46

  • prefrontal cortex

  • placenta

  • Pituitary Gland

  • gonad
Top expressed in
  • tail of embryo

  • epiblast

  • lung

  • palate

  • soft palate

  • yolk sac

  • Cortex of frontal lobe

  • embryo

  • primary visual cortex

  • superior frontal gyrus
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2119

104156

Ensembl

ENSG00000244405

ENSMUSG00000013089

UniProt

P41161

Q9CXC9

RefSeq (mRNA)

NM_004454

NM_023794
NM_001358428

RefSeq (protein)

NP_004445

NP_076283
NP_001345357

Location (UCSC)Chr 3: 186.05 – 186.11 MbChr 16: 22.2 – 22.26 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse
ets variant gene 5 (ets-related molecule)
Identifiers
SymbolETV5
Alt. symbolsERM
NCBI gene2119
HGNC3494
OMIM601600
RefSeqNM_004454
UniProtP41161
Other data
LocusChr. 3 q28
Search for
StructuresSwiss-model
DomainsInterPro

Ets variant 5 (ETV5) (also named ERM transcription factor) is a transcription factor that in humans is encoded by the ETV5 gene. It is generated in Sertoli cells, which are found in the testes and play a crucial role in spermatogenesis. Its ortholog has been linked to both obesity and bipolar disorder.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000244405Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000013089Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. "Entrez Gene: Ets variant 5".
  6. Williams MJ, Klockars A, Eriksson A, Voisin S, Dnyansagar R, Wiemerslage L, Kasagiannis A, Akram M, Kheder S, Ambrosi V, Hallqvist E, Fredriksson R, Schiöth HB (June 2016). "The Drosophila ETV5 Homologue Ets96B: Molecular Link between Obesity and Bipolar Disorder". PLOS Genetics. 12 (6): e1006104. doi:10.1371/journal.pgen.1006104. PMC 4900636. PMID 27280443.

Further reading


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External links


Transcription factors and intracellular receptors
(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies
Categories: