Misplaced Pages

ETV1

Article snapshot taken from Wikipedia with creative commons attribution-sharealike license. Give it a read and then ask your questions in the chat. We can research this topic together.
Protein-coding gene in the species Homo sapiens

ETV1
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

4AVP, 4BNC

Identifiers
AliasesETV1, ER81, ETS variant 1, ETS variant transcription factor 1
External IDsOMIM: 600541; MGI: 99254; HomoloGene: 3636; GeneCards: ETV1; OMA:ETV1 - orthologs
Gene location (Human)
Chromosome 7 (human)
Chr.Chromosome 7 (human)
Chromosome 7 (human)Genomic location for ETV1Genomic location for ETV1
Band7p21.2Start13,891,229 bp
End13,991,425 bp
Gene location (Mouse)
Chromosome 12 (mouse)
Chr.Chromosome 12 (mouse)
Chromosome 12 (mouse)Genomic location for ETV1Genomic location for ETV1
Band12 A3|12 17.99 cMStart38,829,379 bp
End38,920,483 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • cerebellar vermis

  • parotid gland

  • cerebellar hemisphere

  • right hemisphere of cerebellum

  • visceral pleura

  • lower lobe of lung

  • lateral nuclear group of thalamus

  • paraflocculus of cerebellum

  • right ventricle

  • ventricular zone
Top expressed in
  • parotid gland

  • lobe of cerebellum

  • cerebellar vermis

  • habenula

  • subiculum

  • submandibular gland

  • lacrimal gland

  • internal pyramidal layer of neocortex

  • olfactory bulb

  • Rostral migratory stream
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2115

14009

Ensembl

ENSG00000006468

ENSMUSG00000004151

UniProt

P50549

P41164

RefSeq (mRNA)
NM_001163147
NM_001163148
NM_001163149
NM_001163150
NM_001163151

NM_001163152
NM_004956
NM_001370555
NM_001370556

NM_001163154
NM_007960
NM_001347379

RefSeq (protein)
NP_001156619
NP_001156620
NP_001156621
NP_001156622
NP_001156623

NP_001156624
NP_004947
NP_001357484
NP_001357485

NP_001156626
NP_001334308
NP_031986

Location (UCSC)Chr 7: 13.89 – 13.99 MbChr 12: 38.83 – 38.92 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

ETS translocation variant 1 is a protein that in humans is encoded by the ETV1 gene.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000006468Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000004151Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Brown TA, McKnight SL (Dec 1992). "Specificities of protein-protein and protein-DNA interaction of GABP alpha and two newly defined ets-related proteins". Genes & Development. 6 (12B): 2502–12. doi:10.1101/gad.6.12b.2502. PMID 1340465.
  6. "Entrez Gene: ETV1 ets variant gene 1".

Further reading

External links

Stub icon

This article on a gene on human chromosome 7 is a stub. You can help Misplaced Pages by expanding it.

Transcription factors and intracellular receptors
(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies
Categories: