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PBX3

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Protein found in humans
PBX3
Identifiers
AliasesPBX3, PBX homeobox 3
External IDsOMIM: 176312; MGI: 97496; HomoloGene: 21243; GeneCards: PBX3; OMA:PBX3 - orthologs
Gene location (Human)
Chromosome 9 (human)
Chr.Chromosome 9 (human)
Chromosome 9 (human)Genomic location for PBX3Genomic location for PBX3
Band9q33.3Start125,747,345 bp
End125,967,377 bp
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)
Chromosome 2 (mouse)Genomic location for PBX3Genomic location for PBX3
Band2 B|2 22.84 cMStart34,061,469 bp
End34,263,154 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • left ovary

  • right adrenal cortex

  • right ovary

  • left adrenal cortex

  • muscle layer of sigmoid colon

  • right auricle

  • internal globus pallidus

  • C1 segment

  • gallbladder

  • vena cava
Top expressed in
  • Rostral migratory stream

  • epithelium of lens

  • substantia nigra

  • olfactory bulb

  • dorsal striatum

  • ciliary body

  • retinal pigment epithelium

  • dorsal tegmental nucleus

  • adrenal gland

  • external carotid artery
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

5090

18516

Ensembl

ENSG00000167081

ENSMUSG00000038718

UniProt

P40426
Q96AL5

O35317

RefSeq (mRNA)

NM_001134778
NM_006195
NM_001330782

NM_001290576
NM_016768

RefSeq (protein)

NP_001128250
NP_001317711
NP_006186
NP_006186.1

NP_001277505
NP_058048

Location (UCSC)Chr 9: 125.75 – 125.97 MbChr 2: 34.06 – 34.26 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Pre-B-cell leukemia transcription factor 3 is a protein that in humans is encoded by the PBX3 gene.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000167081Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000038718Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Monica K, Galili N, Nourse J, Saltman D, Cleary ML (Dec 1991). "PBX2 and PBX3, new homeobox genes with extensive homology to the human proto-oncogene PBX1". Mol Cell Biol. 11 (12): 6149–57. doi:10.1128/mcb.11.12.6149. PMC 361792. PMID 1682799.
  6. "Entrez Gene: PBX3 pre-B-cell leukemia homeobox 3".

Further reading

External links

PDB gallery
  • 1b72: PBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX 1b72: PBX1, HOMEOBOX PROTEIN HOX-B1/DNA TERNARY COMPLEX
  • 1b8i: STRUCTURE OF THE HOMEOTIC UBX/EXD/DNA TERNARY COMPLEX 1b8i: STRUCTURE OF THE HOMEOTIC UBX/EXD/DNA TERNARY COMPLEX
  • 1du6: SOLUTION STRUCTURE OF THE TRUNCATED PBX HOMEODOMAIN 1du6: SOLUTION STRUCTURE OF THE TRUNCATED PBX HOMEODOMAIN
  • 1lfu: NMR solution structure of the extended PBX homeodomain bound to DNA 1lfu: NMR solution structure of the extended PBX homeodomain bound to DNA
  • 1puf: Crystal structure of HoxA9 and Pbx1 homeodomains bound to DNA 1puf: Crystal structure of HoxA9 and Pbx1 homeodomains bound to DNA
Transcription factors and intracellular receptors
(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies

This article incorporates text from the United States National Library of Medicine, which is in the public domain.


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