Misplaced Pages

Estrogen-related receptor gamma

Article snapshot taken from Wikipedia with creative commons attribution-sharealike license. Give it a read and then ask your questions in the chat. We can research this topic together.
Protein-coding gene in the species Homo sapiens
ESRRG
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1KV6, 1TFC, 1VJB, 2E2R, 2EWP, 2GP7, 2GPO, 2GPP, 2GPU, 2GPV, 2P7A, 2P7G, 2P7Z, 2ZAS, 2ZBS, 2ZKC

Identifiers
AliasesESRRG, ERR3, ERRgamma, NR3B3, estrogen related receptor gamma, ERRg, ERR-gamma
External IDsOMIM: 602969; MGI: 1347056; HomoloGene: 55581; GeneCards: ESRRG; OMA:ESRRG - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)
Chromosome 1 (human)Genomic location for ESRRGGenomic location for ESRRG
Band1q41Start216,503,246 bp
End217,137,755 bp
Gene location (Mouse)
Chromosome 1 (mouse)
Chr.Chromosome 1 (mouse)
Chromosome 1 (mouse)Genomic location for ESRRGGenomic location for ESRRG
Band1|1 H5- H6Start187,340,988 bp
End187,947,082 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • Pons

  • kidney tubule

  • endothelial cell

  • renal medulla

  • Brodmann area 23

  • right ventricle

  • parotid gland

  • thoracic diaphragm

  • Epithelium of choroid plexus

  • biceps brachii
Top expressed in
  • pontine nuclei

  • deep cerebellar nuclei

  • medial vestibular nucleus

  • epithelium of stomach

  • lateral geniculate nucleus

  • submandibular gland

  • pineal gland

  • globus pallidus

  • dorsal tegmental nucleus

  • facial motor nucleus
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

2104

26381

Ensembl

ENSG00000196482

ENSMUSG00000026610

UniProt

P62508

P62509

RefSeq (mRNA)
NM_001134285
NM_001243505
NM_001243506
NM_001243507
NM_001243509

NM_001243510
NM_001243511
NM_001243512
NM_001243513
NM_001243514
NM_001243515
NM_001243518
NM_001243519
NM_001438
NM_206594
NM_206595
NM_001350122
NM_001350123
NM_001350124
NM_001350125

NM_001243792
NM_011935
NM_001357534
NM_001357535
NM_001357536

RefSeq (protein)
NP_001127757
NP_001230434
NP_001230435
NP_001230436
NP_001230438

NP_001230439
NP_001230440
NP_001230441
NP_001230442
NP_001230443
NP_001230444
NP_001230447
NP_001230448
NP_001429
NP_996317
NP_996318
NP_001337051
NP_001337052
NP_001337053
NP_001337054

NP_001230721
NP_036065
NP_001344463
NP_001344464
NP_001344465

Location (UCSC)Chr 1: 216.5 – 217.14 MbChr 1: 187.34 – 187.95 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Estrogen-related receptor gamma (ERR-gamma), also known as NR3B3 (nuclear receptor subfamily 3, group B, member 3), is a nuclear receptor that in humans is encoded by the ESRRG (EStrogen Related Receptor Gamma) gene. It behaves as a constitutive activator of transcription.

This protein is a member of nuclear hormone receptor family of steroid hormone receptors. No physiological activating ligand is known for this orphan receptor, but 4-hydroxytamoxifen and diethylstilbestrol act as inverse agonists and deactivate ESRRG. It also seems to be the target of bisphenol A (see below).

Bisphenol A binding

Further information: Bisphenol A

There is evidence that bisphenol A functions as a xenoestrogen by binding strongly to ERR-γ. BPA as well as its nitrated and chlorinated metabolites seems to binds strongly to ERR-γ (dissociation constant = 5.5 nM), but not to the estrogen receptor (ER)., BPA binding to ERR-γ preserves its basal constitutive activity. It can also protect it from deactivation from the selective estrogen receptor modulator 4-hydroxytamoxifen.

Different expression of ERR-γ in different parts of the body may account for variations in bisphenol A effects. For instance, ERR-γ has been found in high concentration in the placenta, explaining reports of high bisphenol A accumulation there.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000196482Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000026610Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. "Entrez Gene: ESRRG estrogen-related receptor gamma".
  6. Eudy JD, Yao S, Weston MD, Ma-Edmonds M, Talmadge CB, Cheng JJ, Kimberling WJ, Sumegi J (Jun 1998). "Isolation of a gene encoding a novel member of the nuclear receptor superfamily from the critical region of Usher syndrome type IIa at 1q41". Genomics. 50 (3): 382–4. doi:10.1006/geno.1998.5345. PMID 9676434.
  7. Chen F, Zhang Q, McDonald T, Davidoff MJ, Bailey W, Bai C, Liu Q, Caskey CT (Mar 1999). "Identification of two hERR2-related novel nuclear receptors utilizing bioinformatics and inverse PCR". Gene. 228 (1–2): 101–9. doi:10.1016/S0378-1119(98)00619-2. PMID 10072763.
  8. ^ Matsushima A, Kakuta Y, Teramoto T, Koshiba T, Liu X, Okada H, Tokunaga T, Kawabata S, Kimura M, Shimohigashi Y (Oct 2007). "Structural evidence for endocrine disruptor bisphenol A binding to human nuclear receptor ERR gamma". Journal of Biochemistry. 142 (4): 517–24. doi:10.1093/jb/mvm158. PMID 17761695.
  9. Huppunen J, Aarnisalo P (Feb 2004). "Dimerization modulates the activity of the orphan nuclear receptor ERRgamma". Biochemical and Biophysical Research Communications. 314 (4): 964–70. doi:10.1016/j.bbrc.2003.12.194. PMID 14751226.
  10. Babu S, Vellore NA, Kasibotla AV, Dwayne HJ, Stubblefield MA, Uppu RM (Sep 2012). "Molecular docking of bisphenol A and its nitrated and chlorinated metabolites onto human estrogen-related receptor-gamma". Biochemical and Biophysical Research Communications. 426 (2): 215–20. doi:10.1016/j.bbrc.2012.08.065. PMID 22935422.
  11. Takeda Y, Liu X, Sumiyoshi M, Matsushima A, Shimohigashi M, Shimohigashi Y (Jul 2009). "Placenta expressing the greatest quantity of bisphenol A receptor ERR{gamma} among the human reproductive tissues: Predominant expression of type-1 ERRgamma isoform". Journal of Biochemistry. 146 (1): 113–22. doi:10.1093/jb/mvp049. PMID 19304792.

Further reading

PDB gallery
  • 1kv6: X-ray structure of the orphan nuclear receptor ERR3 ligand-binding domain in the constitutively active conformation 1kv6: X-ray structure of the orphan nuclear receptor ERR3 ligand-binding domain in the constitutively active conformation
  • 1lo1: ESTROGEN RELATED RECEPTOR 2 DNA BINDING DOMAIN IN COMPLEX WITH DNA 1lo1: ESTROGEN RELATED RECEPTOR 2 DNA BINDING DOMAIN IN COMPLEX WITH DNA
  • 1s9p: crystal structure of the ligand-binding domain of the estrogen-related receptor gamma in complex with diethylstilbestrol 1s9p: crystal structure of the ligand-binding domain of the estrogen-related receptor gamma in complex with diethylstilbestrol
  • 1s9q: crystal structure of the ligand-binding domain of the estrogen-related receptor gamma in complex with 4-hydroxytamoxifen 1s9q: crystal structure of the ligand-binding domain of the estrogen-related receptor gamma in complex with 4-hydroxytamoxifen
  • 1tfc: CRYSTAL STRUCTURE OF THE LIGAND-BINDING DOMAIN OF THE ESTROGEN-RELATED RECEPTOR GAMMA IN COMPLEX WITH A STEROID RECEPTOR COACTIVATOR-1 PEPTIDE 1tfc: CRYSTAL STRUCTURE OF THE LIGAND-BINDING DOMAIN OF THE ESTROGEN-RELATED RECEPTOR GAMMA IN COMPLEX WITH A STEROID RECEPTOR COACTIVATOR-1 PEPTIDE
  • 1vjb: crystal structure of the ligand-binding domain of the estrogen-related receptor gamma in complex with 4-hydroxytamoxifen 1vjb: crystal structure of the ligand-binding domain of the estrogen-related receptor gamma in complex with 4-hydroxytamoxifen
  • 2ewp: Crystal structure of Estrogen Related Reecptor-3 (ERR-gamma) ligand binding domaind with tamoxifen analog GSK5182 2ewp: Crystal structure of Estrogen Related Reecptor-3 (ERR-gamma) ligand binding domaind with tamoxifen analog GSK5182
  • 2gp7: Estrogen Related Receptor-gamma ligand binding domain 2gp7: Estrogen Related Receptor-gamma ligand binding domain
  • 2gpo: Estrogen Related Receptor-gamma ligand binding domain complexed with a synthetic peptide from RIP140 2gpo: Estrogen Related Receptor-gamma ligand binding domain complexed with a synthetic peptide from RIP140
  • 2gpp: Estrogen Related Receptor-gamma ligand binding domain complexed with a RIP140 peptide and synthetic ligand GSK4716 2gpp: Estrogen Related Receptor-gamma ligand binding domain complexed with a RIP140 peptide and synthetic ligand GSK4716
  • 2gpu: Estrogen Related Receptor-gamma ligand binding domain complexed with 4-hydroxy-tamoxifen 2gpu: Estrogen Related Receptor-gamma ligand binding domain complexed with 4-hydroxy-tamoxifen
  • 2gpv: Estrogen Related Receptor-gamma ligand binding domain complexed with 4-hydroxy-tamoxifen and a SMRT peptide 2gpv: Estrogen Related Receptor-gamma ligand binding domain complexed with 4-hydroxy-tamoxifen and a SMRT peptide
Transcription factors and intracellular receptors
(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies
Estrogen-related receptor modulators
ERRαTooltip Estrogen-related receptor alpha
ERRβTooltip Estrogen-related receptor beta
ERRγTooltip Estrogen-related receptor gamma
See also
Receptor/signaling modulators
Categories: