Misplaced Pages

Retinoid X receptor gamma

Article snapshot taken from Wikipedia with creative commons attribution-sharealike license. Give it a read and then ask your questions in the chat. We can research this topic together.
Protein-coding gene in the species Homo sapiens
RXRG
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

2GL8

Identifiers
AliasesRXRG, NR2B3, RXRC, Retinoid X receptor gamma, RXR-gamma, RXRgamma
External IDsOMIM: 180247; MGI: 98216; HomoloGene: 21373; GeneCards: RXRG; OMA:RXRG - orthologs
Gene location (Human)
Chromosome 1 (human)
Chr.Chromosome 1 (human)
Chromosome 1 (human)Genomic location for RXRGGenomic location for RXRG
Band1q23.3Start165,400,922 bp
End165,445,355 bp
Gene location (Mouse)
Chromosome 1 (mouse)
Chr.Chromosome 1 (mouse)
Chromosome 1 (mouse)Genomic location for RXRGGenomic location for RXRG
Band1 H2.3|1 74.99 cMStart167,425,953 bp
End167,467,192 bp
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • muscle of thigh

  • anterior pituitary

  • gastrocnemius muscle

  • caudate nucleus

  • putamen

  • nucleus accumbens

  • testicle

  • C1 segment

  • islet of Langerhans

  • tibial nerve
Top expressed in
  • lumbar spinal ganglion

  • muscle of thigh

  • triceps brachii muscle

  • temporal muscle

  • quadriceps femoris muscle

  • vastus lateralis muscle

  • sternocleidomastoid muscle

  • myocardium of ventricle

  • striatum of neuraxis

  • superior frontal gyrus
More reference expression data
BioGPS
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

6258

20183

Ensembl

ENSG00000143171

ENSMUSG00000015843

UniProt

P48443

P28705

RefSeq (mRNA)

NM_001256570
NM_001256571
NM_006917

NM_001159731
NM_009107

RefSeq (protein)

NP_001243499
NP_001243500
NP_008848

NP_001153203
NP_033133

Location (UCSC)Chr 1: 165.4 – 165.45 MbChr 1: 167.43 – 167.47 Mb
PubMed search
Wikidata
View/Edit HumanView/Edit Mouse

Retinoid X receptor gamma (RXR-gamma), also known as NR2B3 (nuclear receptor subfamily 2, group B, member 3) is a nuclear receptor that in humans is encoded by the RXRG gene.

Function

This gene encodes a member of the retinoid X receptor (RXR) family of nuclear receptors which are involved in mediating the antiproliferative effects of retinoic acid (RA). This receptor forms heterodimers with the retinoic acid, thyroid hormone, and vitamin D receptors, increasing both DNA binding and transcriptional function on their respective response elements. This gene is expressed at significantly lower levels in non-small cell lung cancer cells. Alternate transcriptional splice variants, encoding different isoforms, have been characterized.

See also

Interactions

Retinoid X receptor gamma has been shown to interact with ITGB3BP.

References

  1. ^ GRCh38: Ensembl release 89: ENSG00000143171Ensembl, May 2017
  2. ^ GRCm38: Ensembl release 89: ENSMUSG00000015843Ensembl, May 2017
  3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. Almasan A, Mangelsdorf DJ, Ong ES, Wahl GM, Evans RM (April 1994). "Chromosomal localization of the human retinoid X receptors". Genomics. 20 (3): 397–403. doi:10.1006/geno.1994.1193. PMID 8034312.
  6. ^ "Entrez Gene: RXRG retinoid X receptor, gamma".
  7. Li D, Wang F, Samuels HH (Dec 2001). "Domain structure of the NRIF3 family of coregulators suggests potential dual roles in transcriptional regulation". Mol. Cell. Biol. 21 (24): 8371–84. doi:10.1128/MCB.21.24.8371-8384.2001. PMC 100002. PMID 11713274.

Further reading

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

PDB gallery
  • 1by4: STRUCTURE AND MECHANISM OF THE HOMODIMERIC ASSEMBLY OF THE RXR ON DNA 1by4: STRUCTURE AND MECHANISM OF THE HOMODIMERIC ASSEMBLY OF THE RXR ON DNA
  • 1dsz: STRUCTURE OF THE RXR/RAR DNA-BINDING DOMAIN HETERODIMER IN COMPLEX WITH THE RETINOIC ACID RESPONSE ELEMENT DR1 1dsz: STRUCTURE OF THE RXR/RAR DNA-BINDING DOMAIN HETERODIMER IN COMPLEX WITH THE RETINOIC ACID RESPONSE ELEMENT DR1
  • 1r0n: Crystal Structure of Heterodimeric Ecdsyone receptor DNA binding complex 1r0n: Crystal Structure of Heterodimeric Ecdsyone receptor DNA binding complex
  • 1rxr: HIGH RESOLUTION SOLUTION STRUCTURE OF THE RETINOID X RECEPTOR DNA BINDING DOMAIN, NMR, 20 STRUCTURE 1rxr: HIGH RESOLUTION SOLUTION STRUCTURE OF THE RETINOID X RECEPTOR DNA BINDING DOMAIN, NMR, 20 STRUCTURE
  • 2gl8: Human Retinoic acid receptor RXR-gamma ligand-binding domain 2gl8: Human Retinoic acid receptor RXR-gamma ligand-binding domain
  • 2nll: RETINOID X RECEPTOR-THYROID HORMONE RECEPTOR DNA-BINDING DOMAIN HETERODIMER BOUND TO THYROID RESPONSE ELEMENT DNA 2nll: RETINOID X RECEPTOR-THYROID HORMONE RECEPTOR DNA-BINDING DOMAIN HETERODIMER BOUND TO THYROID RESPONSE ELEMENT DNA
Transcription factors and intracellular receptors
(1) Basic domains
(1.1) Basic leucine zipper (bZIP)
(1.2) Basic helix-loop-helix (bHLH)
Group A
Group B
Group C
bHLH-PAS
Group D
Group E
Group F
bHLH-COE
(1.3) bHLH-ZIP
(1.4) NF-1
(1.5) RF-X
(1.6) Basic helix-span-helix (bHSH)
(2) Zinc finger DNA-binding domains
(2.1) Nuclear receptor (Cys4)
subfamily 1
subfamily 2
subfamily 3
subfamily 4
subfamily 5
subfamily 6
subfamily 0
(2.2) Other Cys4
(2.3) Cys2His2
(2.4) Cys6
(2.5) Alternating composition
(2.6) WRKY
(3) Helix-turn-helix domains
(3.1) Homeodomain
Antennapedia
ANTP class
protoHOX
Hox-like
metaHOX
NK-like
other
(3.2) Paired box
(3.3) Fork head / winged helix
(3.4) Heat shock factors
(3.5) Tryptophan clusters
(3.6) TEA domain
  • transcriptional enhancer factor
(4) β-Scaffold factors with minor groove contacts
(4.1) Rel homology region
(4.2) STAT
(4.3) p53-like
(4.4) MADS box
(4.6) TATA-binding proteins
(4.7) High-mobility group
(4.9) Grainyhead
(4.10) Cold-shock domain
(4.11) Runt
(0) Other transcription factors
(0.2) HMGI(Y)
(0.3) Pocket domain
(0.5) AP-2/EREBP-related factors
(0.6) Miscellaneous
see also transcription factor/coregulator deficiencies
Retinoid receptor modulators
RARTooltip Retinoic acid receptor
  • Retinoic acid metabolism inhibitors: Liarozole
RXRTooltip Retinoid X receptor
See also
Receptor/signaling modulators


Stub icon

This article on a gene on human chromosome 1 is a stub. You can help Misplaced Pages by expanding it.

Categories: